None of the companies, as far as I'm aware are non-profit. However, there are several that run charity organizations.
Fuente and J.C. Newman have the Cigar Family Charitable Foundation (cf-cf.org)
Drew Estate's has their own charity organization and are a big supporter of Operation Esteli (see link in my sig)
There is also Cigars For Warriors (
http://cigarsforwarriors.org)
These are just a few of the several charity organizations in the industry.